University of Washington Jobs – Bioinformatics Apply Online
University of Washington Jobs – Bioinformatics Apply Online. Interested and eligible applicants can check out all of the details on the same below:
RESEARCH SCIENTIST/ENGINEER 3
Req #: 231092
Department: DEPARTMENT OF NEUROLOGICAL SURGERY
Job Location: Seattle Campus
Posting Date: 02/21/2024
Closing Info: Open Until Filled
Salary: $5,427 – $8,500 per month
Other Compensation:
Union Position: Yes
Shift: First Shift
Benefits: As a UW employee, you will enjoy generous benefits and work/life programs. For a complete description of our benefits for this position, please visit our website, click here.
As a UW employee, you have a unique opportunity to change lives on our campuses, in our state and around the world. UW employees offer their boundless energy, creative problem-solving skills and dedication to build stronger minds and a healthier world.
UW faculty and staff also enjoy outstanding benefits, professional growth opportunities and unique resources in an environment noted for diversity, intellectual excitement, artistic pursuits and natural beauty.
POSITION PURPOSE
Our lab is focused on establishing and interpreting multi-omic signatures of orphan diseases of the brain. We apply cutting edge techniques such as bulk/single-cell/spatial RNA-seq, WGS, WES, and proteomics to interrogate disease heterogeneity, pathogenesis, and evolution in patient samples that are collected directly from the operating room. We also utilize computational approaches and AI-based algorithms to identify new applications for approved or investigational drugs. Validation studies are conducted in patient specimens, cell culture and patient-derived organoids. Our goal is to combine molecular data, statistical analysis, machine learning, AI, and clinical data to identify opportunities to improve treatment, diagnosis, evaluate therapy response, and ultimately, bring precision medicine to the clinic.
DUTIES AND RESPONSIBILITIES
This position, the Research Scientist/Engineer 3 (E S UAW RSE), will play an important role in the development and maintenance of bioinformatics pipelines used for QC and processing of high-throughput data as well as in the integrated analysis of large datasets. This position requires the ability to apply R and python algorithms for data processing, manipulation, and visualization to extract meaningful insights from complex data. Experience in pipeline development, automation and documentation using GitLab, GitHub, and rmarkdown is required. Additional skills needed for this position include: HPC, SLURM, bash scripting, machine learning, AI, and Linux OS.
Bioinformatics Management: 90%
- Design, develop, and maintain research-related custom software used in a high-throughput, next-generation sequencing.
- Serve as a bioinformatics expert to guide wet lab scientists in data interpretation and troubleshooting bench experiments.
- Participate in developing, implementing and maintaining new workflows.
- Thrive in a fast-paced work environment that requires independent self-direction with an aptitude for team collaboration and open communication.
- Provide support in writing manuscripts, abstracts, and presentations.
- Present findings at group meetings and conferences, if necessary.
- Responsible for review and interpretation of omics results under direction of principal investigators.
- Develop and coordinate data analysis strategies and implementation for large research projects.
- Update variant curation strategies, variant scoring process, interpretation process, and reporting process on an ongoing basis.
- Develop expertise in interpreting genetic data from open source and proprietary analysis software and databases.
- Support/design of software tools to assist in more efficient variant review for the variant review scientist and affiliated faculty.
- Integrate omics data to extract meaningful insights into disease pathogenesis.
Other Duties as Assigned: 10%
MINIMUM REQUIREMENTS
- Bachelor’s degree in a related field
- Four years of relevant experience, OR Equivalent combination of education/experience.
Equivalent education/experience will substitute for all minimum qualifications except when there are legal requirements, such as a license/certification/registration.
DESIRED QUALIFICATIONS
- Master’s degree in Bioinformatics, Data Science, Computer Sciences, Statistics, Biology, Genetics, Biotechnology or related field
- R: statistics, data manipulation, clustering, visualization, and analysis.
- Bash/Unix command line/awk: data processing, text parsing, handling, and manipulation.
- Pipeline development, automation, and documentation (GitHub, GitLab, rmarkdown)
- Python: statistics, data manipulation, parsing, and visualization, supervised and unsupervised learning, machine learning.
- AI for medical imaging
Application Process: The application process may include completion of a variety of online assessments to obtain additional information that will be used in the evaluation process. These assessments may include Work Authorization, Cover Letter and/or others. Any assessments that you need to complete will appear on your screen as soon as you select “Apply to this position”. Once you begin an assessment, it must be completed at that time; if you do not complete the assessment, you will be prompted to do so the next time you your “My Jobs” page. If you select to take it later, it will appear on your “My Jobs” page to take when you are access ready. Please note that your application will not be reviewed, and you will not be considered for this position until all required assessments have been completed.
Committed to attracting and retaining a diverse staff, the University of Washington will honor your experiences, perspectives and unique identity. Together, our community strives to create and maintain working and learning environments that are inclusive, equitable and welcoming.
The University of Washington is an affirmative action and equal opportunity employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, gender expression, national origin, age, protected veteran or disabled status, or genetic information.
To request disability accommodation in the application process, contact the Disability Services Office at 206-543-6450 or [email protected].
Applicants considered for this position will be required to disclose if they are the subject of any substantiated findings or current investigations related to sexual misconduct at their current employment and past employment. Disclosure is required under Washington state law.
Link to apply: Apply here
Keywords: Research Scientist job, Engineer job, Bioinformatics, Data Science, University of Washington, Seattle, RNA-seq, Genomic sequencing, Precision Medicine, R, Python, AI. University of Washington Jobs – Bioinformatics Apply Online
